narG
 
Information for narG, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1277180-1278571
+
CDS
nitrite extrusion protein
1279087-1282830
+
CDS
narG
nitrate reductase 1; alpha subunit
1282827-1284365
+
CDS
nitrate reductase 1; beta subunit
 
Reported regulatory sites for narG:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1278978-1278999
fnr
transcriptional regulation of aerobic anaerobic respiration osmotic balance
1278879-1278926
ihf
integration host factor (IHF)
1278819-1278834
narL
pleiotrophic regulation of anaerobic respiration: response regulator for nar frd dms and tor genes
1278929-1278944
narL
pleiotrophic regulation of anaerobic respiration: response regulator for nar frd dms and tor genes
 
Species with an ortholog: PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.932
1278750-1278766
tgcgt CATTTAGTTACAACATA ctaat
-
0
-
2.829
1278718-1278736
ccttt GCGCGGCATGATGTCGCGC ttttt
-
0
-
2.639
1278981-1278996
tcact CTTGATCGTTATCAAT tccca
fnr
16
-
2.639
1279027-1279042
ttgcc CTTAAACATTAGCAAT gtcga
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

Click here to go back