|
narG
|
| |
| Information
for narG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1277180-1278571
|
+
|
CDS
|
|
|
nitrite extrusion protein
|
|
1279087-1282830
|
+
|
CDS
|
narG
|
|
nitrate reductase 1; alpha subunit
|
|
1282827-1284365
|
+
|
CDS
|
|
|
nitrate reductase 1; beta subunit
|
|
| |
Reported regulatory
sites for narG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
1278978-1278999
|
|
fnr
|
transcriptional regulation of aerobic anaerobic respiration osmotic balance
|
|
1278879-1278926
|
|
ihf
|
integration host factor (IHF)
|
|
1278819-1278834
|
|
narL
|
pleiotrophic regulation of anaerobic respiration: response regulator for nar frd dms and tor genes
|
|
1278929-1278944
|
|
narL
|
pleiotrophic regulation of anaerobic respiration: response regulator for nar frd dms and tor genes
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.932
|
1278750-1278766
|
tgcgt CATTTAGTTACAACATA ctaat
|
-
|
0
|
-
|
|
|
|
|
2.829
|
1278718-1278736
|
ccttt GCGCGGCATGATGTCGCGC ttttt
|
-
|
0
|
-
|
|
|
|
|
2.639
|
1278981-1278996
|
tcact CTTGATCGTTATCAAT tccca
|
fnr
|
16
|
-
|
|
|
|
|
2.639
|
1279027-1279042
|
ttgcc CTTAAACATTAGCAAT gtcga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|