narX
 
Information for narX, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1274402-1275052
-
CDS
pleiotrophic regulation of anaerobic respiration: response regulator for nar; frd; dms and tor genes
1275045-1276841
-
CDS
narX
nitrate/nitrate sensor; histidine protein kinase acts on NarL regulator
1277180-1278571
+
CDS
nitrite extrusion protein
 
Reported regulatory sites for narX:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1276968-1276997
modE
molybdate uptake regulatory protein
 
Species with an ortholog: HI PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.103
1277106-1277121 R
ggcaa TTTGATGTAAATCAAA cgata
fnr
16
-
3.103
1277068-1277083 R
ctatc ATTGATATTTATCATT accca
narL
1
-
2.154
1276986-1277007 R
aaaat CCCTACCCTTACCGATGTAAAG cgact
modE
12
-
2.154
1276941-1276962 R
ataag GAGTAACTCTTTCCGGGTATGG gtata
narL
16
-
2.103
1277022-1277042 R
cttca TAAAAATTATGAGATTTTTCA cggtg
ihf
14
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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