|
narZ
|
| |
| Information
for narZ, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1535333-1536877
|
-
|
CDS
|
|
|
cryptic nitrate reductase 2; beta subunit
|
|
1536874-1540614
|
-
|
CDS
|
narZ
|
|
cryptic nitrate reductase 2; alpha subunit
|
|
1540696-1542084
|
-
|
CDS
|
|
|
nitrite extrusion protein 2
|
|
| |
Reported regulatory
sites for narZ:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.643
|
1540654-1540673 R
|
tacaa CCGTGTCGCATCCGACAAGG catca
|
-
|
0
|
REPt119 (16)
|
|
|
|
|
0.000
|
1540621-1540637 R
|
aattc ATTCCTGGAGCAGGAGT catgt
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|