ndk
 
Information for ndk, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2641149-2642303
-
CDS
orf; hypothetical protein
2642453-2642884
-
CDS
ndk
nucleoside diphosphate kinase
2643033-2645345
-
CDS
putative peptidoglycan enzyme
 
Reported regulatory sites for ndk:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.104
2642983-2643002 R
aaact CATTTTATTTTAAAAAAATG ttacc
-
0
-
1.181
2642935-2642951 R
tgttg CTCATTATAATCCGCGC catct
-
0
-
0.219
2642943-2642966 R
aatag TCAACGGCCCTGTTGCTCATTATA atccg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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