|
nfnB
|
| |
| Information
for nfnB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
602639-603886
|
-
|
CDS
|
|
|
putative transport
|
|
603994-604647
|
-
|
CDS
|
nfnB
|
|
oxygen-insensitive NAD(P)H nitroreductase
|
|
604741-605109
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for nfnB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.358
|
604658-604676 R
|
ctggc ACGCAAAATTACTTTCACA tggag
|
-
|
0
|
-
|
|
|
|
|
1.578
|
604721-604741 R
|
ggcta AAGCGGAAATCTATAGCGCAT ttttc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.09
|
|
p=0.05
|
4.94
|
|
p=0.1
|
4.37
|
|
p=0.2
|
3.74
|
|
|