nrdB
 
Information for nrdB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2342885-2345170
+
CDS
ribonucleoside diphosphate reductase 1; alpha subunit; B1
2345404-2346534
+
CDS
nrdB
ribonucleoside-diphosphate reductase 1; beta subunit; B2
2346534-2346788
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for nrdB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.370
2345183-2345206
atgcc GGATGCGGCGTAAACGCCTTATCC ggcct
-
0
REP164a (24)
4.370
2345270-2345293
gtgcc GGATGCAGCGTGAACGCCTTATCC ggcct
-
0
REP164c (24)
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.926
2345221-2345236
ctcgg TTTGTAGGCCTGATAA gacgc
-
0
REP164b (13)
3.926
2345309-2345324
tcgga TTTGTAGGCCTGATAA gacgc
-
0
REP164d (13)
3.495
2345238-2345254
ataag ACGCGCCAGCGTCGCAT caggc
-
0
REP164b (17)
3.495
2345326-2345342
ataag ACGCGCCAGCGTCGCAT caggc
-
0
REP164d (17)
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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