|
nrdG
|
| |
| Information
for nrdG, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4457127-4457429
|
+
|
CDS
|
|
|
cytochrome b(562)
|
|
4457474-4457938
|
-
|
CDS
|
nrdG
|
|
anaerobic ribonucleotide reductase activating protein
|
|
4458096-4460234
|
-
|
CDS
|
|
|
anaerobic ribonucleoside-triphosphate reductase
|
|
| |
Reported regulatory
sites for nrdG:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.181
|
4458041-4458056 R
|
cgtaa ACGCCTTATCCGGCCT acatt
|
-
|
0
|
REP338b (16)
|
|
|
|
|
4.181
|
4458007-4458022 R
|
gctcc AGGTCTGATAAGACGC gacag
|
-
|
0
|
REP338a (16)
|
|
|
|
|
1.869
|
4458052-4458072 R
|
caaat GCCGGATGCGGCGTAAACGCC ttatc
|
-
|
0
|
REP338b (21)
|
|
|
|
|
1.869
|
4457989-4458009 R
|
taaga CGCGACAGCGTCGCATCAGGC attga
|
-
|
0
|
REP338a (21)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|