|
nrdH
|
| |
| Information
for nrdH, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2798155-2798496
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
2798744-2798989
|
+
|
CDS
|
nrdH
|
|
glutaredoxin-like protein; hydrogen donor
|
|
2798986-2799396
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for nrdH:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.980
|
2798639-2798660
|
ttgtg TGGTTGAATCTTTTTTCAACTA catct
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.242
|
2798694-2798715
|
acaac CCGACGCGTATCATCGCGCCGT atctt
|
-
|
0
|
-
|
|
|
|
|
3.328
|
2798717-2798735
|
ccgta TCTTCATTTTAAACGGAAA tacga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|