nrfE

Information for nrfE, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 4288055-4289011 + CDS nrfD EG11947 formate-dependent nitrate reductase complex; transmembrane protein 4289091-4290749 + CDS nrfE EG11948 formate-dependent nitrite reductase; possible assembly function 4290742-4291125 + CDS nrfF EG11949 part of formate-dependent nitrite reductase complex

Reported regulatory sites for nrfE: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: PA SP ST EC

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 4.633 4289072-4289090 ttgtt GTTAAGTCTCGGGGTCAAC gtgtt - 0 - 4.089 4289046-4289064 tcctt CCTGAAGTCGGTTTTCTGG cgttg - 0 - 0.324 4289027-4289042 aggtg GTTTCTGGACGTATTC cttcc - 0 -

Critical MAP values: p=0.01 6.09 p=0.05 4.94 p=0.1 4.37 p=0.2 3.74

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