|
ntpA
|
| |
| Information
for ntpA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1945435-1946175
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1946204-1946656
|
-
|
CDS
|
ntpA
|
|
dATP pyrophosphohydrolase
|
|
1946774-1948546
|
-
|
CDS
|
|
|
aspartate tRNA synthetase
|
|
| |
Reported regulatory
sites for ntpA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.055
|
1946744-1946761 R
|
caaat ACACGAAATCATTCGCGT tgcat
|
-
|
0
|
IRU11 (18)
|
|
|
|
|
1.274
|
1946694-1946709 R
|
catga GCATAGATAACTATGT gaatg
|
-
|
0
|
IRU11 (16)
|
|
|
|
|
0.230
|
1946732-1946748 R
|
tcatt CGCGTTGCATCGAGGCG gcaac
|
-
|
0
|
IRU11 (17)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|