nuoA
 
Information for nuoA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2401971-2402633
-
CDS
NADH dehydrogenase I chain B
2402649-2403092
-
CDS
nuoA
NADH dehydrogenase I chain A
2403723-2404661
-
CDS
NADH dehydrogenase transcriptional regulator; LysR family
 
Reported regulatory sites for nuoA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2403579-2403604
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
2403536-2403569
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
2403483-2403506
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
2403239-2403276
ihf
integration host factor (IHF)
 
Species with an ortholog: PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.781
2403246-2403267 R
agaaa CTTTTGTTAAAGTTGACAAAAG gttat
ihf
22
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.133
2403096-2403112 R
tggcg CTACTTTTGATGAGTAA gcaat
-
0
-
2.804
2403271-2403288 R
atatt ATGTAAACTAATGTGAAG aaact
ihf
6
-
2.804
2403209-2403226 R
taaaa AACCACATCAATTAGCTG tataa
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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