|
nuoM
|
| |
| Information
for nuoM, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2388068-2389345
|
-
|
CDS
|
|
|
NADH dehydrogenase I chain N
|
|
2389532-2391061
|
-
|
CDS
|
nuoM
|
|
NADH dehydrogenase I chain M
|
|
2391225-2393066
|
-
|
CDS
|
|
|
NADH dehydrogenase I chain L
|
|
| |
Reported regulatory
sites for nuoM:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.520
|
2391100-2391115 R
|
cgtga GAATTCGTTGAAAATC cggtc
|
-
|
0
|
-
|
|
|
|
|
1.038
|
2391122-2391138 R
|
ccagt CCGAAGAGAATTTTCTG tcgtg
|
-
|
0
|
-
|
|
|
|
|
0.373
|
2391153-2391171 R
|
taagc CGCCTTCGCGGTGCATCCG acact
|
-
|
0
|
REP166 (19)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|