|
nuoN
|
| |
| Information
for nuoN, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2387133-2387984
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
2388068-2389345
|
-
|
CDS
|
nuoN
|
|
NADH dehydrogenase I chain N
|
|
2389532-2391061
|
-
|
CDS
|
|
|
NADH dehydrogenase I chain M
|
|
| |
Reported regulatory
sites for nuoN:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.903
|
2389460-2389481 R
|
ttgct GATCGTCGGCTTGACGGTGGTG gttgt
|
-
|
0
|
-
|
|
|
|
|
4.867
|
2389517-2389532 R
|
ccgta AATCGCCATGACAATA actcc
|
-
|
0
|
-
|
|
|
|
|
4.689
|
2389484-2389506 R
|
acaaa ACCTGATCGCACTGCTACCGTTG ctgat
|
-
|
0
|
-
|
|
|
|
|
4.689
|
2389422-2389444 R
|
tctcc ATTGCGTGGCGACGCAATCATTT cctca
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|