nupC
 
Information for nupC, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2509488-2510726
-
CDS
putative transport system permease
2511062-2512264
+
CDS
nupC
permease of transport system for 3 nucleosides
2512345-2513463
+
CDS
IS186 hypothetical protein
 
Reported regulatory sites for nupC:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.600
2510739-2510760
ctcta AAACATAGCCTTTGCTATGTTT catgc
mntR
22
-
5.389
2511041-2511058
taacc TGCCTCATATTTGGAGCA aatat
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.190
2510774-2510790
gccaa ACGAGAATGATTATCAA attca
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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