ompR
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3532154-3533506
|
-
|
CDS
|
protein histidine kinase/phosphatase sensor for OmpR; modulates expression of ompF and ompC
|
||
|
3533503-3534222
|
-
|
CDS
|
ompR
|
response regulator (sensor; EnvZ) affecting transcription of ompC and ompF: outer membrane protein synthesis
|
|
|
3534414-3534926
|
+
|
CDS
|
transcription elongation factor and transcript cleavage
|
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
3534384-3534405
|
crp
|
cyclic AMP receptor protein
|
|
|
3534371-3534418
|
ihf
|
integration host factor (IHF)
|
|
|
3534317-3534364
|
ihf
|
integration host factor (IHF)
|
|
|
3534418-3534465
|
ihf
|
integration host factor (IHF)
|
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.638
|
3534304-3534327 R
|
ctttg TAACAATTTAGGCTGAAATTCATA ccaga
|
ihf
|
11
|
-
|
 |
 |
 |
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.492
|
3534377-3534395 R
|
tgatc ATATCAACAGAATCAATAA tgttt
|
crp
|
12
|
-
|
 |
 |
|
|
3.492
|
3534319-3534337 R
|
gttta ATATGCTTTGTAACAATTT aggct
|
ihf
|
19
|
-
|
|
|
|
|
2.221
|
3534259-3534282 R
|
acgaa CGTGAGCTTTTTTAAGAATACACG cttac
|
-
|
0
|
-
|
 |
 |
|
|
2.221
|
3534223-3534246 R
|
attgt TGCGAACCTTTGGGAGTACAAACA atgca
|
-
|
0
|
-
|
|
|
|
Critical
MAP values:
|