oppA
 
Information for oppA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1297821-1298468
+
CDS
putative channel protein
1299206-1300837
+
CDS
oppA
oligopeptide transport; periplasmic binding protein
1300923-1301843
+
CDS
oligopeptide transport permease protein
 
Reported regulatory sites for oppA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.703
1299174-1299193
taata CCAGTAATTATAATGAGGGA gtcca
-
0
-
2.696
1298726-1298746
aataa TAATCAATTGTTAAATTATTG tgcat
-
0
-
2.696
1298884-1298904
tgctt AACAATTTTGCAAAATGTATT ggcga
-
0
-
1.704
1299154-1299172
ccggg ATTACACATGCTGGTTAAT accag
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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