osmB
 
Information for osmB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1340679-1341008
+
CDS
orf; hypothetical protein
1341134-1341352
-
CDS
osmB
osmotically inducible lipoprotein
1341621-1342370
-
CDS
putative DEOR-type transcriptional regulator
 
Reported regulatory sites for osmB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.920
1341459-1341482 R
ggaag TCATTATCACCTGCGTGATATAAC cctgc
-
0
-
3.473
1341363-1341381 R
acttc CGTGAATCATAAATTCAGG agaga
-
0
-
2.545
1341490-1341506 R
aaaat TATTATCAGCGATATAA cagga
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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