osmY
 
Information for osmY, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4606983-4608572
+
CDS
peptide chain release factor RF-3
4608965-4609570
+
CDS
osmY
hyperosmotically inducible periplasmic protein
4609980-4611053
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for osmY:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4608699-4608720
crp
cyclic AMP receptor protein
4608612-4608637
ihf
integration host factor (IHF)
4608633-4608721
lrp
regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.678
4608585-4608606
ctcca GGGCGCGGTACGCGCTGCGCCC tgtca
-
0
-
4.285
4608907-4608926
attca GCAATGCAACCTCGTGTTGC caggc
-
0
-
3.399
4608634-4608650
gccgc TTACGGAATGTTCTTAA aacat
lrp
ihf
17
4
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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