pdxB
 
Information for pdxB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2433656-2434669
-
CDS
putative PTS system enzyme II A component
2434735-2435871
-
CDS
pdxB
erythronate-4-phosphate dehyrogenase
2435970-2436965
+
CDS
cell division protein
 
Reported regulatory sites for pdxB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.128
2435895-2435914 R
atggc ACACTTGTCCGGTTAACTCT cgtct
-
0
-
1.023
2435920-2435936 R
aagta TGCCTGGCCGCGAGATT atggc
-
0
-
0.597
2435949-2435965 R
ttacg TATCCTTATACCTGAAA tcttc
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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