pepA
 
Information for pepA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4481405-4481848
-
CDS
DNA polymerase III; chi subunit
4482008-4483519
-
CDS
pepA
aminopeptidase A/I
4483786-4484886
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for pepA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4483736-4483763
carP
aminopeptidase A/I
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.703
4483614-4483630 R
gccgt AATAACGTTAAGATTAA cacga
-
0
-
3.703
4483532-4483548 R
ccgcc GTTGTCTTTAAGATTCA ggagc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.176
4483755-4483770 R
cccgt AAAAACTCGTCTTTTG cagga
carP
9
-
2.139
4483686-4483706 R
ttgag TCGTCGAAATCGTCGCTAAGA taatt
-
0
-
2.139
4483656-4483676 R
tatac TCAACGGATTCACCTCTCAGA ttttg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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