|
pepN
|
| |
| Information
for pepN, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
988377-989579
|
-
|
CDS
|
|
|
nicotinate phosphoribosyltransferase
|
|
989845-992457
|
+
|
CDS
|
pepN
|
|
aminopeptidase N
|
|
992500-993267
|
-
|
CDS
|
|
|
putative ATP-binding component of a transport system
|
|
| |
Reported regulatory
sites for pepN:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.845
|
989717-989739
|
tacgc GGTGTATGTTATAAAAATGTAGC aataa
|
-
|
0
|
-
|
|
|
|
|
1.323
|
989744-989767
|
caata AAGGCGTTTGTACCTGAAAAGATG aagat
|
-
|
0
|
-
|
|
|
|
|
1.272
|
989783-989806
|
atagc GCGATTTACGCAACAGGAATAGAC tgaac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|