pepT
 
Information for pepT, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1183681-1184817
-
CDS
ATP-binding component of spermidine/putrescine transport
1185067-1186293
+
CDS
pepT
putative peptidase T
1186342-1187472
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for pepT:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.433
1184994-1185016
ggggt AAAAGTGACCTGACGCAATATTT gtctt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.561
1184862-1184883
ttaac CACCTTGGTGACTCTTAATGAG ggcgg
-
0
-
2.561
1185021-1185042
tgtct TTTCTTGCTTCTTAATAATGTT gtcac
-
0
-
2.017
1184941-1184964
ctggc TTAGCTTTATATTCATTAAGGTAA tgctg
-
0
-
2.017
1184978-1185001
aatat TCCCGCTTGCAGGGGTAAAAGTGA cctga
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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