perM
 
Information for perM, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2611954-2612802
+
CDS
probable formate transporter (formate channel 2)
2612840-2613901
-
CDS
perM
putative permease
2614114-2615577
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for perM:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.963
2613995-2614012 R
ccact CAAATGACTTTTCAGTTT cctga
-
0
-
1.963
2613963-2613980 R
gtcat AAAAAGCGAAGTCTTTTT tgtga
-
0
-
1.255
2614065-2614081 R
gtcat TTGACCGATACTGTGAA atatc
-
0
-
1.255
2614025-2614041 R
cgcct TTGAGTGTAACGGCGAA gatta
-
0
-
1.087
2613932-2613955 R
tgaca TTTCGATACAATTGCGGATCGCAA tcccg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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