pfkA
 
Information for pfkA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4104049-4104951
+
CDS
putative transport system permease protein
4105132-4106094
+
CDS
pfkA
6-phosphofructokinase I
4106414-4107403
+
CDS
periplasmic sulfate-binding protein
 
Reported regulatory sites for pfkA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
4105011-4105026
fruR
transcriptional repressor of fru operon and others
 
Species with an ortholog: HI ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
8.609
4105007-4105025
ttggc CTGACCTGAATCAATTCAG cagga
fruR
15
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.773
4104976-4104995
gaccc GCATTTTGTGTATAAAATAC cgcca
-
0
-
2.773
4105032-4105051
aggaa GTGATTGTTATACTATTTGC acatt
-
0
-
2.360
4105055-4105076
gcaca TTCGTTGGATCACTTCGATGTG caaga
-
0
-
2.360
4105107-4105128
cattt TGCATTCCAAAGTTCAGAGGTA gtcat
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

Click here to go back