|
pflA
|
| |
| Information
for pflA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
948891-949481
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
949563-950303
|
-
|
CDS
|
pflA
|
|
pyruvate formate lyase activating enzyme 1
|
|
950495-952777
|
-
|
CDS
|
|
|
formate acetyltransferase 1
|
|
| |
Reported regulatory
sites for pflA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.919
|
950427-950444 R
|
tccac GAAAGTGGGGCCTTTTTT agcgc
|
-
|
0
|
-
|
|
|
|
|
1.858
|
950478-950497 R
|
ctatg TAATTAGATTTGACTGAAAT cgtac
|
-
|
0
|
-
|
|
|
|
|
0.430
|
950389-950404 R
|
tgtca GCTATCTATACTTTAA ggtga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|