pgi
 
Information for pgi, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4229463-4230812
-
CDS
aspartokinase III; lysine sensitive
4231337-4232986
+
CDS
pgi
glucosephosphate isomerase
4233485-4233727
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for pgi:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.429
4231272-4231290
tcaca TTTTTCTGTGACTGGCGCT acaat
-
0
-
1.377
4231118-4231133
tagta CATTTATAAATAAAGG gtgag
-
0
-
1.207
4231254-4231270
ctaac GGCACTAAAACCATCAC atttt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back