pgk
 
Information for pgk, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3068185-3069264
-
CDS
fructose-bisphosphate aldolase; class II
3069479-3070642
-
CDS
pgk
phosphoglycerate kinase
3070692-3071711
-
CDS
D-erythrose 4-phosphate dehydrogenase
 
Reported regulatory sites for pgk:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.391
3070644-3070665 R
acttt TAGAATCAACGAGAGGATTCAC catgt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.253
3070676-3070692 R
aggta AGACGCAAGCAGCGTCT gcaaa
-
0
-
1.075
3070666-3070683 R
gcaag CAGCGTCTGCAAAACTTT tagaa
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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