pgpB
 
Information for pgpB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1336594-1337184
-
CDS
GTP cyclohydrolase II
1337354-1338118
+
CDS
pgpB
non-essential phosphatidylglycerophosphate phosphatase; membrane bound
1338267-1338575
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for pgpB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.308
1337229-1337252
ttgcc ATAACGAGAAGGGGTTCACCTAAT cacga
-
0
-
3.233
1337283-1337299
tggca CAAATCTGTCAATTTTT cctgg
-
0
-
1.386
1337325-1337344
ttatg ATTGTGGGACTTATCAAAAA ggaga
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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