pheA
 
Information for pheA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2735619-2735666
+
CDS
leader peptide of chorismate mutase-P-prephenate dehydratase
2735765-2736925
+
CDS
pheA
chorismate mutase-P and prephenate dehydratase
2736968-2738089
-
CDS
chorismate mutase-T and prephenate dehydrogenase
 
Reported regulatory sites for pheA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2735638-2735704
Neidhardt (2nd edition) E.coli and Salmonella
stem-loop
attenuator
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.769
2735300-2735319
tgtcc AAAGAGCCACAAGGGTTTGT tgctg
-
0
-
3.769
2735539-2735558
tcgcc AACGCGCCTTCGGGCGCGTT ttttg
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.113
2735655-2735678
ttttt ACCTTCCCCTGAATGGGAGGCGTT tcgtc
stem-loop
24
-
3.100
2735714-2735736
caata AGGCCTCCCAAATCGGGGGGCCT ttttt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

Click here to go back