pheS
 
Information for pheS, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1793581-1795968
-
CDS
phenylalanine tRNA synthetase; beta-subunit
1795983-1796966
-
CDS
pheS
phenylalanine tRNA synthetase; alpha-subunit
1797250-1797294
-
CDS
phenylalanyl-tRNA synthetase (pheST) operon leader peptide
 
Reported regulatory sites for pheS:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1797209-1797285
Neidhardt (2nd edition) E.coli and Salmonella
stem-loop
attenuator
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.272
1797385-1797407 R
gttga AAGAGGGAGCTAGTCTCCCTCTT ttcgt
-
0
-
2.560
1797181-1797204 R
cgcct GAAAGCCTCCCAGTGGAGGCTTTT tttgt
-
0
-
2.560
1797010-1797033 R
agtaa AATAGCCTGATGGGATAGGCTCTA agtcc
-
0
RSA3 (24)
2.121
1797420-1797438 R
gaaaa AGCGAAAGCAGCTCTGGCA taagc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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