phnA
 
Information for phnA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4322876-4323319
-
CDS
orf; hypothetical protein
4323977-4324312
-
CDS
phnA
orf; hypothetical protein
4324713-4326941
+
CDS
putative vimentin
 
Reported regulatory sites for phnA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.896
4324367-4324385 R
ttgtg TATAATTGCGGCCTTTTTC ggcaa
-
0
-
2.017
4324386-4324407 R
acccc CGACAAACTCAGGGATTTTGTG tataa
-
0
-
1.365
4324605-4324628 R
tactg CAAGAAATAATTTTATATTTAGTG tgttg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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