|
pldB
|
| |
| Information
for pldB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4006046-4006462
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
4006776-4007798
|
+
|
CDS
|
pldB
|
|
lysophospholipase L(2)
|
|
4007918-4008433
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for pldB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.072
|
4006687-4006703
|
gtcta TTTTTGTGCCACAATAC gctac
|
-
|
0
|
-
|
|
|
|
|
3.265
|
4006592-4006614
|
tgttg ATTGCACCAGAGCCTGGCGACAG gctta
|
-
|
0
|
-
|
|
|
|
|
2.027
|
4006635-4006651
|
tgtca GCAGGTAGGCAAACCAC cattc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|