|
plsB
|
| |
| Information
for plsB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4250595-4251467
|
+
|
CDS
|
|
|
4-hydroxybenzoate-octaprenyltransferase
|
|
4251622-4254105
|
-
|
CDS
|
plsB
|
|
glycerol-3-phosphate acyltransferase
|
|
4254216-4254584
|
+
|
CDS
|
|
|
diacylglycerol kinase
|
|
| |
Reported regulatory
sites for plsB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.167
|
4254188-4254208 R
|
aaaga ACCTTTTTACATTATGAGCGT caata
|
-
|
0
|
-
|
|
|
|
|
2.297
|
4254132-4254148 R
|
gtttg CGTAGCGCCGCGCGAAA catga
|
-
|
0
|
-
|
|
|
|
|
1.997
|
4254141-4254162 R
|
atccg ATGATTCGGGTTTGCGTAGCGC cgcgc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|