pmrD

Information for pmrD, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 2370630-2371298 + CDS b2258 EG14094 putative transport/receptor protein 2371292-2371588 - CDS pmrD EG12671 polymyxin resistance protein B 2371668-2373023 - CDS menE EG12437 o-succinylbenzoate-CoA ligase

Reported regulatory sites for pmrD: Genome coordinates Source Transcription factor Transcription factor annotation

Species with an ortholog: ST EC

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 0.932 2371595-2371612 R agagt TTATCTGTTAATCTGTAA attga - 0 - 0.074 2371622-2371638 R ttctg CCATTCCATTGCCGTTG ataaa - 0 -

Critical MAP values: p=0.01 7.59 p=0.05 6.45 p=0.1 5.76 p=0.2 5.04

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