pntA
 
Information for pntA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1672996-1674384
-
CDS
pyridine nucleotide transhydrogenase; beta subunit
1674395-1675927
-
CDS
pntA
pyridine nucleotide transhydrogenase; alpha subunit
1676451-1677395
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for pntA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.990
1676233-1676253 R
gcaac TGAATTGTATAAGTTAATTTA atgtt
-
0
-
1.335
1676394-1676410 R
ggtat TGTTATTAACGAGAAAC gtggc
-
0
-
1.335
1676371-1676387 R
tggct GATTATTGCATTTAAAC ggtgt
-
0
-
1.155
1676041-1676058 R
cataa TTTTCAGTACGTTATAGG gcgtt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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