|
poxB
|
| |
| Information
for poxB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
907516-908517
|
-
|
CDS
|
|
|
putative arylsulfatase
|
|
908554-910272
|
-
|
CDS
|
poxB
|
|
pyruvate oxidase
|
|
910405-911373
|
-
|
CDS
|
|
|
putative enzyme
|
|
| |
Reported regulatory
sites for poxB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.822
|
910371-910394 R
|
ttatg CCCGATGATATTCCTTTCATCGGG ctatt
|
-
|
0
|
REPt84 (24)
|
|
-
|
|
|
3.458
|
910289-910311 R
|
gaact AAACTTGTTACCGTTATCACATT cagga
|
-
|
0
|
-
|
|
|
|
|
0.167
|
910350-910373 R
|
tcatc GGGCTATTTAACCGTTAGTGCCTC ctttc
|
-
|
0
|
REPt84 (4)
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|