pphA
 
Information for pphA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1920061-1920336
+
CDS
orf; hypothetical protein
1920337-1920996
-
CDS
pphA
protein phosphatase 1 modulates phosphoproteins; signals protein misfolding
1921389-1921730
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for pphA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.026
1921197-1921220 R
gcaac TAAGCCTGCATTAATGCCAACTTT tagcg
-
0
-
1.026
1921066-1921089 R
acttt ATAGTCAACCATAACACACACTCT actgt
-
0
-
0.769
1921034-1921053 R
gagtc CAGCGTTTTTTAACATTCTT gttaa
-
0
-
0.000
1921262-1921281 R
attga CCATTTTGCACGCAAACTGG aaaac
-
0
-
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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