pphB
 
Information for pphB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2855116-2857677
+
CDS
methyl-directed mismatch repair
2857783-2858439
+
CDS
pphB
protein phosphatase 2
2858490-2859287
-
CDS
putative DEOR-type transcriptional regulator
 
Reported regulatory sites for pphB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.578
2857748-2857771
accct GTATAATAGGAAAGCTTATTTTAC agggt
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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