ppiA
 
Information for ppiA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3489090-3489257
-
CDS
orf; hypothetical protein
3489362-3489934
-
CDS
ppiA
peptidyl-prolyl cis-trans isomerase A (rotamase A)
3490205-3491386
+
CDS
putative transport
 
Reported regulatory sites for ppiA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
3490012-3490026
cpxR
transcriptional regulator in 2-component system
3490117-3490138
crp
cyclic AMP receptor protein
3490064-3490085
crp
cyclic AMP receptor protein
3490088-3490114
cytR
regulator for deo operon udp cdd tsx nupC and nupG
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.120
3490014-3490029 R
tcaga TACGTAAAATTAGGTA aaggg
cpxR
13
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.059
3490023-3490045 R
tcagg TTACATATATTTCAGATACGTAA aatta
cpxR
4
-
1.431
3490052-3490073 R
atttt GATCACGGAATAAAAAGTGATC gtcag
crp
10
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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