ppiC
 
Information for ppiC, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3955591-3957066
+
CDS
ketol-acid reductoisomerase
3957150-3957431
-
CDS
ppiC
peptidyl-prolyl cis-trans isomerase C (rotamase C)
3957627-3957902
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for ppiC:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.248
3957511-3957532 R
ggctt TTGCCATATATGTACCAGCCAC tccct
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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