priA
 
Information for priA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4121011-4122036
-
CDS
regulator for deo operon; udp; cdd; tsx; nupC; and nupG
4122192-4124390
-
CDS
priA
primosomal protein N'(= factor Y)(putative helicase)
4124593-4124805
+
CDS
50S ribosomal subunit protein L31
 
Reported regulatory sites for priA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.791
4124566-4124588 R
tggga AAACCTCGGTTTAAGGCCGCGTC gctct
-
0
-
1.791
4124473-4124495 R
gtacg AAGGCGCGAAATCATACAGAAAT taacc
-
0
-
1.391
4124532-4124551 R
gccct AACGCCAGACACCACGCGAT gttaa
-
0
-
1.068
4124393-4124413 R
ccacc GAATTTCAAGTCAGGATGATG ctatg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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