prkB
 
Information for prkB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3481855-3482073
+
CDS
orf; hypothetical protein
3482127-3482996
+
CDS
prkB
probable phosphoribulokinase
3483051-3483455
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for prkB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.596
3482108-3482125
tgata GCTAAGTCATGGAGTTAC tatgt
-
0
-
0.502
3482076-3482099
taacc TGCAACCGTCGGCGGACGAGATAA taatg
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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