pta
 
Information for pta, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2411490-2412692
+
CDS
acetate kinase
2412767-2414911
+
CDS
pta
phosphotransacetylase
2415080-2416621
+
CDS
putative S-transferase
 
Reported regulatory sites for pta:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.639
2412698-2412720
tttca CACCGCCAGCTCAGCTGGCGGTG ctgtt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.814
2412714-2412737
cagct GGCGGTGCTGTTTTGTAACCCGCC aaatc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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