ptsG
 
Information for ptsG, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1156000-1156797
+
CDS
orf; hypothetical protein
1157092-1158525
+
CDS
ptsG
PTS system; glucose-specific IIBC component
1158585-1160774
-
CDS
outer membrane receptor for ferric iron uptake
 
Reported regulatory sites for ptsG:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1156938-1156959
crp
cyclic AMP receptor protein
1156803-1156825
mlc
putative NAGC-like transcriptional regulator
1156972-1156994
mlc
putative NAGC-like transcriptional regulator
 
Species with an ortholog: SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.354
1156803-1156824
atgag TTTTTTTAAAGCTCGTAATTAA tggct
mlc
22
-
5.354
1156972-1156993
ctgaa TTATTTTACTCTGTGTAATAAA taaag
mlc
22
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.528
1156995-1157015
taaat AAAGGGCGCTTAGATGCCCTG tacac
-
0
-
3.185
1156844-1156867
aaagt TCACCGCCGAAAATTGGGCGGTGA ataac
-
0
-
3.185
1157029-1157052
gaggc TCTCCCCCCTTGCCACGCGTGAGA acgta
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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