|
qor
|
| |
| Information
for qor, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4260209-4260661
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
4260827-4261810
|
-
|
CDS
|
qor
|
|
quinone oxidoreductase
|
|
4261893-4263308
|
+
|
CDS
|
|
|
replicative DNA helicase; part of primosome
|
|
| |
Reported regulatory
sites for qor:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.970
|
4261877-4261892 R
|
gccat AGTGAATGGAGTTACC gagat
|
-
|
0
|
-
|
|
|
|
|
1.567
|
4261860-4261876 R
|
ttacc GAGATAAAGAATGGGTC gaaac
|
-
|
0
|
-
|
|
|
|
|
1.255
|
4261845-4261864 R
|
agaat GGGTCGAAACTTTATCATAT gaagc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|