queA
 
Information for queA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
423561-424142
-
CDS
putative glycoprotein
424235-425305
+
CDS
queA
synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
425361-426488
+
CDS
tRNA-guanine transglycosylase
 
Reported regulatory sites for queA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
424134-424168
fis
site-specific DNA inversion stimulation factor; DNA-binding protein; a trans activator for transcription
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.215
424195-424218
ccggc ACTAGACTACCCGCCTCTTATTTT agtct
-
0
-
0.811
424177-424193
ggttg CAGGGAGAGCGCCCCGG cacta
-
0
-
0.643
424158-424176
ctatc CAAAAGGGGGTAAAGGTTG caggg
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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