radC
 
Information for radC, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3809065-3809301
-
CDS
50S ribosomal subunit protein L28
3809518-3810192
-
CDS
radC
DNA repair protein
3810286-3811578
+
CDS
flavoprotein affecting synthesis of DNA and pantothenate metabolism
 
Reported regulatory sites for radC:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.968
3810253-3810276 R
gattc ACTTTGCGAGGCGCTTTCCAGGAT tgaaa
-
0
-
0.685
3810231-3810252 R
aggat TGAAAACTGGCCGTCGATTTAA cgaaa
-
0
-
0.578
3810202-3810224 R
gaaac GGCTATGACAGGATGCGAGCACC acaaa
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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