recN
 
Information for recN, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2748852-2749730
+
CDS
orf; hypothetical protein
2749816-2751477
+
CDS
recN
protein used in recombination and DNA repair
2751815-2751967
+
CDS
small membrane protein A
 
Reported regulatory sites for recN:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
2749748-2749767
lexA
regulator for SOS(lexA) regulon
2749770-2749789
lexA
regulator for SOS(lexA) regulon
2749790-2749807
lexA
regulator for SOS(lexA) regulon
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.672
2749747-2749768
cctct TTACTGTATATAAAACCAGTTT atact
lexA
20
-
7.672
2749769-2749790
agttt ATACTGTACACAATAACAGTAA tggtt
lexA
21
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.659
2749794-2749810
aatgg TTTTTCATACAGGAAAA cgact
lexA
14
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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