rfbB
 
Information for rfbB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2109099-2109998
-
CDS
dTDP-6-deoxy-L-mannose-dehydrogenase
2109998-2111083
-
CDS
rfbB
dTDP-glucose 4;6 dehydratase
2111456-2112349
-
CDS
homolog of Salmonella UTP--glucose-1-P uridyltransferase; probably a UDP-gal transferase
 
Reported regulatory sites for rfbB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.937
2111400-2111421 R
aagaa AATTATAACGGCAGTGAAAATT cgcag
-
0
-
1.739
2111162-2111184 R
tggta GCTGTAAAGCCAGGGGCGGTAGC gtgca
-
0
-
1.617
2111252-2111270 R
attgg TAAGACAATTAGCGTTTGA atttt
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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