rhlE
 
Information for rhlE, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
829195-829878
-
CDS
putative transcriptional regulator
830095-831459
+
CDS
rhlE
putative ATP-dependent RNA helicase
831691-832173
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for rhlE:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.664
830011-830032
ccctc ATGACATTGTGGTTTTTGTCAT tttcc
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.749
830039-830057
ttcct TTTCAGTATCTCCCTGAAA actac
-
0
-
2.156
829879-829902
tccat TCTTAATCAAATGATTGATTAAGA ttatg
-
0
-
 
Critical MAP values:
p=0.01
5.40
p=0.05
4.29
p=0.1
3.77
p=0.2
3.19

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